Ritchie Lab Visualization
Home
PhenoGram
Plot
Documentation
Examples
PheWAS-View
Plot
Sun Plot
Documentation
Examples
Synthesis-View
Plot
Documentation
Examples
Synthesis-View Plot
Input file
Optional files
Phenotype Summary
Gene Summary
LD
Options log
Abbreviations
SNP source
Image format
PNG
jpg
PDF
Title
General plot features
Rotate?
Larger font?
Grayscale?
Axis scaling
maximum
cleaner
Additional SNP locations?
Offset overlapping points?
Phenotype summary plot name
Odds ratio and forest plot options
Produce forest plot?
Minimum forest plot x-axis at zero?
Plot case/control totals
none
combined
split
Plot case/control CAF
none
combined
split
Sig or large
Draw legend?
P-Value options
Include p-value track?
Plot p-values as circles?
Draw line at this p-value
Maximum y-axis setting for p-value track
Highlighted group
Other options
Include direction of effect?
Effect label
beta
Effect Size
LD D-prime track?
LD R-squared track?
SNP position track?
Power track?
Interaction plot?